Gene name | Entrez gene id | Chromosome | Start | End | Cytoband | BR:MCF7 | BR:MDA-MB-231 | BR:HS 578T | BR:BT-549 | BR:T-47D | CNS:SF-268 | CNS:SF-295 | CNS:SF-539 | CNS:SNB-19 | CNS:SNB-75 | CNS:U251 | CO:COLO 205 | CO:HCC-2998 | CO:HCT-116 | CO:HCT-15 | CO:HT29 | CO:KM12 | CO:SW-620 | LE:CCRF-CEM | LE:HL-60(TB) | LE:K-562 | LE:MOLT-4 | LE:RPMI-8226 | LE:SR | ME:LOX IMVI | ME:MALME-3M | ME:M14 | ME:SK-MEL-2 | ME:SK-MEL-28 | ME:SK-MEL-5 | ME:UACC-257 | ME:UACC-62 | ME:MDA-MB-435 | ME:MDA-N | LC:A549/ATCC | LC:EKVX | LC:HOP-62 | LC:HOP-92 | LC:NCI-H226 | LC:NCI-H23 | LC:NCI-H322M | LC:NCI-H460 | LC:NCI-H522 | OV:IGROV1 | OV:OVCAR-3 | OV:OVCAR-4 | OV:OVCAR-5 | OV:OVCAR-8 | OV:SK-OV-3 | OV:NCI/ADR-RES | PR:PC-3 | PR:DU-145 | RE:786-0 | RE:A498 | RE:ACHN | RE:CAKI-1 | RE:RXF 393 | RE:SN12C | RE:TK-10 | RE:UO-31 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ABCA4 | 24 | 1 | 94458393 | 94586705 | 1p22 | -3.95 | 0.41 | 0.37 | 1.12 | -3.65 | -2.29 | 2.23 | 2.42 | 3.07 | 0.01 | -4.32 | 2.45 | 2.64 | -1.03 | 2.2 | 0.27 | 2.65 | 1.71 | -5.34 | 3.37 | 1.81 | -5.56 | 1.23 | -1.74 | 2.09 | 1.64 | 2.05 | 1.1 | 1.71 | 2.15 | -2.83 | 1.66 | 1.76 | 1.64 | 1.59 | -1.09 | 2.47 | -1.83 | -6.98 | -3.97 | 0.15 | 2.71 | 1.1 | -3.75 | -3.4 | -5.17 | 1.82 | -0.42 | -1.03 | 0.75 | -3.95 | 1.1 | 1.79 | 1.97 | 1.63 | -1.3 | -1.6 | -0.31 | 1.58 | 3.01 |
ABCD3 | 5825 | 1 | 94883932 | 94984219 | 1p21.3 | 1.68 | -2.07 | -1.8 | -0.66 | 1.33 | -0.005 | -0.96 | -0.23 | -0.39 | -1.07 | -1.18 | -0.89 | -0.22 | -0.25 | -1.09 | -1.02 | 1.22 | -0.6 | -0.53 | -1.25 | 1.07 | -0.53 | 1.06 | 2.08 | -0.23 | 0.32 | 0.36 | -0.43 | -0.73 | 1 | -0.34 | 2.43 | 0.78 | 1.69 | 1.57 | -1.07 | 0.02 | -1.13 | 0.43 | -0.11 | 2.56 | 0.22 | 1.4 | -0.3 | -1.34 | -0.86 | -1.03 | -0.001 | -1.17 | 0.45 | 0.001 | 0.48 | -0.8 | -0.05 | 0.74 | 0.58 | -1.1 | 1.49 | -0.15 | 0.68 |
ABCB10 | 23456 | 1 | 229652328 | 229694442 | 1q42.13 | 1.65 | -1.08 | -0.35 | -0.4 | -0.21 | -0.45 | 0.33 | 0.82 | -0.33 | -0.99 | 0.61 | -0.51 | -0.76 | 0.33 | -2.41 | -1.29 | -0.1 | -1.24 | -1.19 | -3.08 | -0.97 | 0.41 | -1.81 | 0.91 | 0.58 | 0.75 | 0.7 | 1.37 | -0.04 | 0.18 | 0.08 | 0.59 | 0.78 | 0.74 | 1.09 | -1.16 | -0.2 | -1.7 | 1.78 | 0.52 | -0.27 | -0.96 | 0.41 | -0.21 | 0.82 | 1.09 | -0.33 | 1.47 | -0.53 | 0.37 | 0.4 | -0.07 | -1.4 | 0.44 | -0.25 | -0.3 | -0.52 | 0.7 | -0.01 | 5.21 |
ABCG5 | 64240 | 2 | 44039610 | 44065958 | 2p21 | -0.04 | -0.06 | 0.64 | 0.19 | 0.75 | 0.17 | 0.34 | 0.04 | -0.7 | 0.52 | 0.14 | 0.08 | 0.29 | 0.35 | 0.32 | 0.09 | -0.78 | -0.21 | -0.09 | 0.47 | 1.1 | 0.67 | 0.45 | 0.2 | -1.23 | -2.27 | -1.41 | -1.61 | -1.07 | 0.72 | -1.22 | -0.82 | 0.67 | 0.05 | -1.16 | 0.74 | -0.03 | 0.44 | 1.29 | 0.95 | 1.43 | 0.49 | 0.83 | -0.03 | -0.55 | -0.83 | -0.22 | -0.61 | -0.73 | 0.49 | 0.39 | 1.47 | 0.09 | -0.36 | -0.36 | 0.96 | 1.29 | -0.9 | 0.02 | -1.89 |
ABCG8 | 64241 | 2 | 44066102 | 44105605 | 2p21 | -0.81 | -0.26 | 3.09 | -0.89 | -1.45 | 1.08 | 3.24 | -1.23 | 3.24 | 3.41 | 3.24 | -2.21 | -1.58 | 3.05 | -0.49 | 3.24 | -1.76 | -0.13 | -1.72 | 2.9 | 0.47 | -0.007 | 2.9 | -2.55 | -0.28 | -3.08 | -0.72 | -3.83 | 2.18 | -0.03 | 2.97 | -2.62 | -1.59 | -3.62 | 1.34 | 1.91 | 1.84 | 2.37 | -0.21 | -2.53 | 2.45 | 3 | 1.22 | -3.03 | -2.15 | -1.64 | 0.86 | -11.56 | -0.69 | -3.18 | 2.01 | 2 | 0.26 | -0.34 | -0.64 | -1.53 | 4.41 | -2.86 | 0.22 | 2.33 |
ABCB11 | 8647 | 2 | 169779448 | 169887833 | 2q24 | -0.61 | 1.12 | -0.71 | 0.03 | 1.28 | 1.35 | 1.14 | -3.01 | -4.81 | -2.76 | -3 | -1.28 | -2.71 | 1.8 | 1.12 | -4.78 | 1.57 | 2.24 | 1.6 | -2.41 | -1.15 | 1.16 | 0.15 | 1.29 | -3.76 | 0.55 | 0.96 | 0.01 | 0.62 | 1.07 | 1 | 0.57 | 0.67 | 0.55 | 0.5 | 2.34 | -0.92 | 1.44 | 1.88 | 1.21 | 1.24 | -2.28 | 0.02 | -1.07 | -4.05 | 0.009 | 1.8 | 1.44 | 0.89 | 0.85 | -8.1 | 0.01 | 1.97 | 2.32 | 0.54 | 0.91 | 1.86 | 1.57 | 0.49 | 2.16 |
ABCA12 | 26154 | 2 | 215796265 | 216003151 | 2q34 | -5.42 | 2.06 | 2.96 | 2.51 | -7.13 | 2.26 | -0.67 | -0.54 | -1.72 | -2.4 | 1.16 | -6.89 | 1.62 | -1.76 | 1.14 | -1.57 | -3.23 | 2.26 | 2.06 | 1.54 | 2.51 | 2.51 | 1.54 | 1.87 | 1.17 | 2.69 | 2.02 | 1.6 | -2.26 | 2.76 | 0.28 | -2.79 | 2.51 | 2.31 | -0.009 | -0.86 | 0.48 | -0.18 | -2.76 | 1.05 | 1.1 | 0.81 | -0.13 | 2.96 | 2.06 | 1.87 | 2.26 | 1.87 | 2.06 | 2.51 | 0.65 | 0.64 | -3.85 | -5.06 | -3.84 | -4.1 | -7.35 | 2.06 | 1.87 | -3.2 |
ABCB6 | 10058 | 2 | 220074487 | 220083712 | 2q36 | 0.01 | 0.19 | -1.37 | 0.25 | -0.37 | -0.21 | -1.14 | -1.52 | -2.17 | -0.79 | -2.25 | 0.61 | -1.89 | 0.09 | 0.34 | 0.38 | 0.4 | -0.22 | -0.64 | 0.78 | -0.29 | 1.85 | 1.89 | 1.21 | 0.34 | 1.13 | 0.23 | 0.46 | 0.13 | -1.56 | -0.65 | -0.38 | -0.55 | -0.28 | -1.53 | 0.69 | 0.63 | 0.88 | 0.66 | 1.15 | -0.2 | 0.18 | -0.72 | -0.86 | 0.08 | 0.35 | 0.02 | 0.85 | 1.72 | 0.29 | 0.74 | -0.15 | -0.58 | -1.08 | 0.9 | 1.34 | -0.39 | 0.005 | 0.19 | 0.78 |
ABCC5 | 10057 | 3 | 183637723 | 183735727 | 3q27 | -2.43 | 2.67 | -2.42 | -0.45 | 1.59 | 5.36 | 4.84 | -2.08 | 1.41 | -0.89 | 1.53 | 0.41 | -2.25 | -0.57 | -0.23 | 2.23 | 0.77 | 0.19 | -1.6 | -1.3 | -3.94 | -1.84 | 0.39 | 4.8 | -3.52 | -0.73 | -0.4 | 0.57 | -0.56 | -0.9 | -4.41 | -3.95 | 1.66 | 1.54 | -0.42 | 4.73 | -1.67 | 2.32 | 2.56 | 1.38 | -0.5 | 0.45 | -2.02 | -2.51 | -0.65 | -0.55 | -0.44 | -0.88 | -0.13 | -1.13 | -1.31 | 0.17 | -0.38 | 4.18 | 1.08 | -0.07 | 0.3 | 2.73 | -1.96 | -0.72 |
ABCF3 | 55324 | 3 | 183903862 | 183911795 | 3q27.1 | 0.63 | -1.01 | -0.99 | -0.51 | -0.36 | 0.72 | -0.49 | -1.01 | -0.37 | -0.61 | -0.72 | 0.12 | -0.57 | 0.66 | -0.78 | -0.27 | 0.43 | 0.02 | 1.19 | 0.49 | 0.19 | -0.14 | -0.5 | 0.15 | 0.09 | -0.47 | 0.32 | -0.46 | -0.07 | 0.82 | -0.4 | 0.81 | 0.52 | 1.04 | 0.81 | 0.51 | -0.01 | -0.29 | 0.88 | -0.17 | 0.06 | 0.72 | -0.11 | 0.57 | -1.08 | 0.2 | -0.75 | 1.12 | 0.57 | -0.56 | 0.37 | -0.03 | -1.07 | 0.1 | 0.24 | -0.06 | -1.01 | 1.74 | -0.14 | -1.05 |
ABCG2 | 9429 | 4 | 89011415 | 89152474 | 4q22 | -1.3 | -0.58 | -0.51 | 0.02 | 0.13 | -1.79 | -4.31 | 1.84 | 1.79 | -1.6 | 1.89 | -1.41 | -5.23 | 0.71 | 1.82 | -3.63 | -4.95 | 4.38 | 0.43 | 4.74 | 1.84 | 3.84 | -6.75 | 2.95 | 2.48 | -1.17 | -0.16 | -1.15 | -0.47 | -0.01 | -1.53 | -1.6 | -2.78 | -2.41 | 0.02 | 3.32 | -3.43 | -1 | 4.31 | -3.37 | -3.83 | -3.12 | 2.7 | 2.19 | 1.05 | 0.66 | 1.8 | 1.5 | 1.11 | 2.77 | 4.74 | -0.29 | -2.08 | 1.57 | 0.91 | 1.81 | 0.71 | -2.22 | 1.27 | 1.33 |
ABCE1 | 6059 | 4 | 146019155 | 146050676 | 4q31 | 1.22 | -1.12 | -0.98 | -1.24 | 2.82 | -0.24 | -0.97 | -0.53 | -0.84 | -0.61 | -0.5 | -0.46 | -0.32 | -0.47 | -1.36 | -1.06 | -0.05 | -1.33 | -0.11 | -1.65 | -1.23 | -2.02 | -0.48 | 0.16 | 0.01 | 0.14 | 0.91 | 1.31 | 0.77 | 1.33 | -0.41 | 1.82 | 1.1 | 3.11 | 2.93 | 0.08 | -0.18 | 0.14 | 2.38 | -0.6 | 2.55 | 0.17 | 2.87 | 0.2 | -1.73 | 0.48 | -0.62 | -0.07 | -0.03 | -1.34 | -0.22 | -1 | -1.92 | -0.21 | -0.13 | -0.3 | -0.04 | 0.92 | 0.08 | -1.06 |
ABCF1 | 23 | 6 | 30539169 | 30559309 | 6p21.33 | 0.64 | -1.91 | -1.16 | -1.62 | 0.4 | 0.19 | 0.41 | -1.76 | -0.01 | -0.59 | -0.21 | -0.42 | -1.05 | 0.72 | 0.51 | 0.23 | 2.24 | 0.71 | 0.16 | -0.76 | -1.31 | -0.5 | -0.81 | -0.19 | -0.66 | 1.76 | 0.91 | -2.24 | 0.35 | 0.66 | -0.53 | 0.91 | 0.3 | 0.51 | 1.77 | 0.44 | -0.76 | -0.09 | 0.59 | -0.36 | 0.6 | 1.05 | 0.19 | 1.1 | -1.12 | 1.04 | 0.22 | 0.99 | 0.67 | -1.39 | 0.51 | 0.22 | -1.36 | 0.84 | 0.3 | -0.36 | -1.08 | 0.35 | -0.56 | 0.27 |
TAP2 | 6891 | 6 | 32789609 | 32806600 | 6p21.3 | 1.23 | -1.15 | -0.33 | -0.38 | 1.39 | 0.65 | -1.77 | -0.68 | 1.11 | -1.59 | -3.71 | 0.99 | -0.4 | -0.15 | 0.13 | -0.89 | -1.23 | 0.69 | 1.09 | -0.34 | 1.32 | -1.67 | 0.32 | -1.88 | -0.88 | 1.68 | 2.33 | -0.41 | 2.24 | 0.04 | 1.89 | -0.55 | 0.33 | -1.21 | -2.39 | 1.19 | 0.6 | 0.28 | -0.35 | 0.43 | -0.22 | 1.16 | -0.32 | 0.02 | -0.39 | -0.19 | -0.06 | 0.36 | 0.84 | 0.41 | 0.69 | 0.4 | -2.28 | -0.19 | 0.44 | 1.18 | 2.13 | -0.33 | -0.15 | -1.47 |
TAP1 | 6890 | 6 | 32812985 | 32821748 | 6p21.3 | 0.83 | 0.005 | -1.77 | -1.82 | 2.83 | -1.7 | 1.72 | -3.02 | 1.63 | -3.9 | 2.2 | -0.51 | -0.79 | -1.47 | 0.47 | -2.31 | 1.29 | 0.97 | -0.11 | -0.68 | 0.55 | -0.21 | -2.58 | -0.95 | -3.54 | 0.47 | 1.29 | 0.49 | 3.37 | 0.2 | -0.92 | -0.52 | 1.9 | 1.37 | -1.78 | 0.95 | -1.39 | 1.88 | -0.79 | 2.31 | 0.69 | 0.4 | 0.21 | 0.09 | 0.54 | 0.37 | 1.15 | 0.43 | -0.58 | -0.07 | -0.54 | 0.63 | -1.32 | 2.78 | 0.88 | -0.87 | -1.37 | 0.76 | -1.45 | 1.26 |
ABCC10 | 89845 | 6 | 43395291 | 43418163 | 6p21.1 | 0.003 | 1.22 | -1.57 | -0.69 | 0.73 | -0.11 | -0.37 | -0.2 | 0.39 | -0.1 | -1.21 | 3.16 | 4.38 | -4.44 | 0.99 | -0.03 | -0.5 | -0.39 | 0.73 | 0.07 | 0.002 | 0.46 | 0.53 | 0.91 | -0.62 | 0.77 | 0.19 | -0.31 | 0.92 | 1.42 | 1.16 | 2.24 | 0.94 | -0.36 | -2 | -0.79 | -0.27 | 1.2 | 0.27 | 1.06 | -1.3 | 1.13 | -0.17 | 1.22 | -0.35 | -1.24 | 0.11 | -0.97 | -1.08 | -3.2 | -1.04 | 0.28 | -0.59 | 2.75 | -0.97 | -0.41 | -1.66 | 1.22 | -1.5 | -2 |
ABCB5 | 340273 | 7 | 20655244 | 20796637 | 7p21.1 | 0.5 | 0.33 | 1.71 | 0.59 | 1.19 | 0.26 | 0.17 | 0.38 | -1 | -0.39 | -0.04 | 0.48 | 0.47 | 0.21 | 0.76 | 0.75 | 0.52 | 0.07 | -1.11 | 0.75 | 0.77 | 1.22 | 0.54 | -0.99 | 1.05 | -3.41 | 1.1 | -2.46 | -3.29 | -3.71 | -7.66 | -2.05 | -5.35 | -2.27 | -0.17 | 1.89 | 0.73 | 1.09 | 1.07 | 2.09 | 0.17 | 1.59 | -0.45 | 0.77 | 1.16 | 0.86 | 0.37 | 1.03 | 0.61 | 1.04 | 0.16 | 0.97 | 0.36 | -0.002 | 1.23 | 1.92 | 1.32 | -0.43 | 0.34 | 0.06 |
ABCB4 | 5244 | 7 | 87031360 | 87105019 | 7q21.1 | -4.34 | 2.45 | 3.72 | 2.72 | -1.01 | 2.04 | -5.65 | -0.99 | -3.21 | 4.14 | -5.4 | 5.34 | 2.66 | 3.24 | -1.86 | -1.08 | 3.22 | -3.1 | 0.44 | 2.44 | -0.57 | -0.22 | 2.35 | 0.49 | -0.07 | -5.07 | -4.97 | -10 | 1.72 | 0.24 | -3.18 | 0.48 | 0.45 | 0.92 | 2.76 | -0.82 | -3.77 | 0.3 | 4.35 | -3.23 | 5.77 | 0.68 | 1.15 | 4.51 | 0.78 | 2.02 | -1.83 | -3.16 | 5.94 | -7.61 | 3.07 | 0.48 | 2.76 | 0.31 | 0.72 | -0.51 | -2.04 | 3.55 | -0.009 | -4.59 |
ABCB1 | 5243 | 7 | 87133178 | 87342639 | 7q21.12 | 2.29 | 1.7 | -0.12 | 0.62 | 1.86 | 1.93 | -2.47 | 1.91 | 1.98 | 3.05 | 2.09 | 1.95 | 2.13 | 2.38 | -11.08 | 1.86 | 1.54 | -3.19 | -1.91 | -0.53 | -0.006 | 1.74 | 0.73 | 1.87 | 1.59 | 1.13 | -2.74 | 0.6 | 1.2 | -1.31 | 1.66 | 1.15 | 1.25 | 1.13 | 1.08 | -3.57 | 1.96 | 2.02 | 2.46 | 1.79 | 1.82 | -3.05 | 0.6 | -1.9 | 2.63 | 2.63 | 2.38 | -1.94 | 1.47 | -12.27 | 2.49 | 0.59 | -2.84 | -4.31 | -3.68 | -8.23 | 1.22 | 2.15 | 1.07 | -4.68 |
CFTR | 1080 | 7 | 117120016 | 117308718 | 7q31.2 | 1.36 | -2.07 | 0.14 | 0.43 | 1.65 | -1.77 | -2.22 | -0.19 | -3.52 | 1.11 | -0.79 | -0.52 | -4.55 | 0.51 | 0.92 | -4.03 | -1.88 | -0.23 | -3.41 | -0.76 | -1.95 | -7.98 | -2.48 | -1.83 | 0.68 | 0.35 | 0.05 | 1.71 | -0.89 | 1.97 | 4.58 | 0.47 | 0.02 | -1.2 | 0.43 | 2.04 | 2.18 | -0.71 | 1.12 | 2.83 | 1.73 | 2.89 | -1.45 | 0.43 | 1.64 | -3.65 | 0.89 | 0.27 | -0.28 | 4.36 | 2.87 | 1.77 | -0.64 | 0.8 | 1.77 | 1.17 | 1.46 | -0.84 | 0.46 | 2.72 |
ABCB8 | 11194 | 7 | 150725508 | 150744869 | 7q36 | 1.51 | 0.06 | -0.96 | -0.36 | 1.85 | -1.15 | -0.55 | -1.97 | -0.71 | -0.67 | -0.67 | -0.98 | -0.88 | 0.86 | 0.5 | 0.37 | 1 | 0.83 | 0.98 | 0.23 | -0.65 | -1.54 | 0.17 | 0.23 | -0.18 | -0.85 | -0.21 | 0.1 | 0.14 | -0.31 | -0.26 | 2.46 | -0.12 | 0.74 | 2.95 | 0.16 | -1.89 | -0.64 | 0.92 | -0.36 | -1.63 | 0.96 | 2 | 1.83 | 0.86 | 1.12 | 1.05 | 3 | 1.08 | -0.77 | -0.33 | -0.56 | -0.25 | -0.69 | -1.13 | -2.97 | -2.1 | 1.04 | -1.38 | -1.24 |
ABCF2 | 10061 | 7 | 150904922 | 150924460 | 7q36 | 1.04 | -0.19 | -1.07 | -1.04 | 1.9 | 0.66 | -0.38 | 0.29 | 0.77 | 0.23 | -0.68 | -0.47 | -0.94 | -0.14 | -1.14 | -0.49 | 0.98 | -0.06 | 0.61 | -0.65 | -0.87 | -1.77 | -1.07 | -1.49 | -0.94 | -1.01 | 0.57 | 0.87 | 1.2 | 0.09 | 0.02 | 0.08 | 0.29 | 1.34 | 1.35 | -0.71 | 0.06 | -1 | 0.42 | -0.76 | 0.26 | 0.25 | 2.18 | 0.48 | -0.78 | 0.15 | 0.03 | 1.06 | 1.61 | -0.69 | 0.24 | -0.53 | 0.11 | -1.02 | -0.77 | -0.44 | 2.54 | 0.64 | -0.11 | -1.14 |
ABCA1 | 19 | 9 | 107543283 | 107690527 | 9q31.1 | 2.06 | -0.36 | 0.5 | -0.36 | 2.49 | 1.83 | 0.23 | -0.57 | 0.48 | -0.75 | 2.19 | 2.58 | 2.61 | 2.39 | -1.41 | -2.96 | 2.64 | -0.16 | 0.63 | -2.95 | 1.93 | -2.04 | -0.7 | -0.62 | 0.1 | -0.06 | 0.01 | 1.19 | -0.38 | -1.06 | 2.29 | -0.04 | -0.26 | 0.11 | -0.35 | 1.05 | 0.67 | -0.1 | -2.06 | 2.42 | -0.62 | -0.7 | -0.91 | 0.08 | -2.6 | 1.9 | 0.65 | -0.39 | 0.5 | -0.37 | -0.54 | 1.22 | -3.28 | -1.26 | -0.03 | -1.37 | -1.63 | -2.14 | -1.22 | -0.47 |
ABCA2 | 20 | 9 | 139901685 | 139923374 | 9q34 | -0.79 | 0.13 | -0.05 | 0.67 | -0.6 | 0.17 | -0.05 | 0.71 | 1.08 | -0.81 | 1.33 | 1.83 | 0.41 | 0.2 | 0.52 | -0.18 | -0.89 | 1.04 | 0.01 | -1.06 | 1.09 | 2.48 | -0.93 | 0.55 | 0.03 | 0.22 | -0.02 | -0.02 | 0.48 | 0.69 | -0.25 | 1.03 | -0.17 | -0.89 | -0.91 | 0.07 | 0.38 | 0.71 | -0.03 | 1.99 | -1.05 | 0.4 | -1.95 | 0.77 | -0.3 | -1.01 | -0.54 | -0.24 | -0.92 | -0.46 | -0.75 | -1.44 | -1.25 | 0.3 | 0.29 | -1.1 | -0.27 | 0.23 | -0.94 | 0.06 |
ABCC2 | 1244 | 10 | 101542354 | 101611949 | 10q24 | 1.11 | 2.83 | 0.01 | -0.15 | 4.46 | 2.02 | -0.04 | 0.29 | 3.25 | 0.99 | 1.19 | -3.18 | -4.68 | -4.85 | 4.1 | 5.63 | -0.52 | -2.69 | 0.48 | 1.41 | 4.27 | 1.03 | 5.61 | 2.97 | 0.24 | -3.84 | -5.61 | -3.08 | -3.39 | -6.05 | -5.39 | -1.17 | -4.46 | -4.49 | -0.15 | 1.95 | -0.93 | 1.78 | -0.26 | -1.85 | -4.08 | -7.22 | 4.27 | 0.18 | 1.31 | 0.82 | 1.83 | 3.18 | 1.36 | 2.6 | 1 | -1.57 | 1.89 | -5.28 | 1.92 | 0.43 | 0.74 | 1.97 | 4 | 1.73 |
ABCC8 | 6833 | 11 | 17414431 | 17498392 | 11p15.1 | -2.18 | 0.59 | 1.49 | 1.04 | 0.93 | -5.97 | 0.42 | 0.93 | 0.42 | 0.58 | 0.42 | 0.49 | 0.15 | 0.22 | -0.32 | 0.42 | 0.74 | -2.1 | 0.59 | 0.07 | 1.04 | 1.04 | 0.07 | 0.4 | -0.29 | 1.22 | 0.55 | 0.13 | 1.63 | 1.29 | 0.15 | 1.11 | 1.04 | 0.84 | -1.48 | 1.38 | -0.98 | -0.45 | 1.63 | -3.09 | -0.36 | -0.1 | -1.6 | -4.98 | 0.59 | 0.4 | -2.32 | 0.4 | -2.05 | 1.04 | -0.81 | -0.82 | 0.49 | 0.93 | 0.74 | 0.74 | 0.93 | 0.59 | 0.4 | -0.49 |
ABCG4 | 64137 | 11 | 119019749 | 119033374 | 11q23.3 | 2.37 | -1.61 | -0.6 | -1.36 | -0.98 | -3.91 | 0.03 | 1.55 | -1.43 | 2 | 0.5 | 1.56 | 2.47 | -0.74 | 1.28 | 1.1 | -1.41 | 0.67 | -3.32 | 0.16 | -0.86 | -0.21 | -1.1 | -2.17 | -0.1 | -0.57 | -0.83 | -1.57 | -2.87 | 0.28 | 2.49 | 0.2 | -1.81 | -1.53 | -1.4 | 0.43 | 2.07 | -0.16 | -1.31 | -1.4 | 0.65 | 2.65 | -1.47 | 1.33 | -1.28 | -0.95 | 0.34 | -0.24 | -0.44 | 1.86 | 2.46 | 0.24 | 1.61 | -0.16 | -0.37 | 3.13 | 1.59 | -1.14 | 2.16 | 2.12 |
ABCC9 | 10060 | 12 | 21950323 | 22089628 | 12p12.1 | -0.48 | 2.27 | -2.82 | 2.6 | -1.22 | -1.66 | 0.6 | 2.82 | 2.49 | 2.2 | 1.47 | 3.99 | 3.65 | -0.49 | 0.83 | 1.78 | -0.01 | 1.41 | -0.07 | 1.49 | -1.73 | 0.96 | -1.18 | -8.14 | -0.79 | 0.85 | 2.85 | 3.63 | -7.58 | 1.03 | 3.65 | -1.14 | 1.31 | -2.03 | 2.02 | -0.31 | -1.24 | -0.06 | -3.38 | 0.39 | 3.13 | -8.22 | 1.89 | -1.04 | 2.06 | -1.37 | 0.5 | -1.23 | -1.46 | 2.02 | -0.61 | 0.24 | 3.99 | -0.8 | -5.08 | -1.79 | 0.12 | -4.47 | -0.87 | 3 |
ABCD2 | 225 | 12 | 39945021 | 40013843 | 12q12 | -0.97 | 0.88 | 1.2 | 0.06 | -0.53 | -0.55 | -0.08 | 0.25 | -0.78 | -0.34 | 0.84 | 0.56 | 1.7 | 0.4 | 0.59 | 0.24 | -1.42 | -0.01 | -1.33 | -0.39 | 0.92 | 0.7 | -0.61 | -0.71 | -0.33 | 1.47 | 0.75 | -0.38 | 1.4 | 0.78 | 1.9 | 0.77 | 0.55 | -0.87 | -0.97 | 0.55 | 0.12 | 0.84 | 0.84 | 1.6 | -2.49 | 0.62 | -1.74 | 0.15 | 0.13 | -2.01 | -0.42 | -1.3 | -1.75 | 0.38 | -0.8 | 0.3 | 0.37 | 1.35 | 0.04 | 0.27 | 0.2 | -0.43 | -0.99 | -1.56 |
ABCB9 | 23457 | 12 | 123405497 | 123451056 | 12q24 | -0.26 | -0.8 | 3.85 | 0.57 | 0.24 | 0.97 | -1.17 | -2.09 | -0.92 | -1.07 | -1.62 | -1.02 | -1.1 | -0.42 | -0.59 | -0.7 | -0.05 | 0.5 | 1.76 | 2.76 | -0.14 | 1.17 | 0.75 | 1.18 | 0.67 | -1.18 | -0.37 | -1.52 | 0.57 | -0.31 | 0.74 | -1.08 | -0.51 | -0.83 | -0.22 | 1.07 | 0.21 | -0.83 | 0.42 | -0.44 | 0.2 | 1.19 | 1.55 | 0.08 | -1.56 | 0.48 | -0.21 | 0.69 | 0.71 | -1.68 | 0.83 | -0.3 | 0.76 | 0.83 | -0.44 | -0.18 | -0.39 | -0.25 | 0.13 | -0.58 |
ABCC4 | 10257 | 13 | 95672082 | 95953700 | 13q32 | 2.76 | -0.8 | 0.62 | -1.69 | 13.62 | 0.79 | -0.69 | -1.03 | 1.52 | -0.2 | 0.83 | 0.12 | 1.82 | -0.43 | 0.39 | -0.2 | -0.71 | -0.23 | 0.31 | -1.74 | -1.06 | 0.98 | -1.24 | 0.13 | -1.96 | 1.04 | 0.19 | 0.71 | -1.42 | -2.09 | -1.16 | -1.12 | -1.2 | -0.42 | -1.69 | -0.48 | 0.39 | 0.25 | -1.1 | 0.7 | 1 | 2.59 | 0.7 | -1.26 | 0.49 | -0.26 | -2.63 | -0.39 | -1.92 | 2.4 | 0.03 | -0.9 | 0.04 | -1.08 | -0.51 | 0.38 | -1.46 | -0.95 | 0.05 | -0.81 |
ABCD4 | 5826 | 14 | 74751979 | 74769767 | 14q24.3 | 0.19 | -1.53 | 0.29 | 1.25 | -0.01 | -0.64 | 2.44 | -0.67 | 0.49 | 0.17 | 0.14 | 0.35 | 1.06 | -0.99 | 0.9 | 1.14 | -0.38 | -0.58 | -1.54 | 0.53 | -0.62 | -0.88 | 0.96 | -1.29 | -0.95 | 0.68 | 1.69 | 0.28 | 0.83 | -0.18 | -1.46 | -1.02 | -3.83 | -0.76 | 1.26 | 1.57 | -0.36 | -0.08 | 0.16 | 0.57 | -0.14 | 1.06 | -0.36 | 0.04 | -2.31 | -0.38 | -1.59 | -0.22 | -1.48 | 0.85 | 0.11 | -0.12 | -0.02 | 1.46 | 0.78 | 1.81 | 0.23 | 0.22 | 0.21 | 0.63 |
ABCA3 | 21 | 16 | 2325878 | 2390747 | 16p13.3 | -3.79 | -0.93 | 2.87 | -3.78 | -5.1 | -4.64 | 0.63 | 8.09 | -1.67 | 2.87 | 1.35 | 6.99 | 2.75 | 0.41 | -2.3 | 4.62 | -3.41 | 0.65 | 7.27 | 2.39 | -5.22 | 5.09 | -0.04 | -6.29 | 5.21 | 2.62 | 3.68 | 5.69 | 4.09 | 2 | 6.67 | 3.47 | 4.96 | 4.63 | -3.82 | -3.37 | 0.71 | 0.03 | -2.83 | -2.72 | 0.25 | -0.03 | -5.19 | -3.31 | 1.56 | -0.82 | -3.34 | -4.11 | -3.41 | -2.4 | -2.59 | -2.41 | 1.55 | -2.42 | -3.05 | 1.18 | -2.51 | -0.97 | -4.14 | -3.67 |
ABCC1 | 4363 | 16 | 16043433 | 16236930 | 16p13.1 | 0.77 | 0.25 | 0.21 | 0.59 | 2.48 | -0.05 | 0.51 | -1.69 | 0.4 | -0.01 | -0.61 | -0.94 | 0.05 | -0.28 | 0.19 | -0.59 | -0.38 | -0.02 | -0.6 | -0.81 | -1.12 | -0.45 | -0.55 | 0.19 | -0.17 | 0.95 | 1.31 | 1.6 | 0.3 | 1.14 | -0.03 | -0.38 | 0.95 | 1.02 | 0.56 | 0.03 | -0.83 | 0.43 | -0.64 | -0.23 | -1.35 | -0.41 | -0.7 | -0.56 | -0.71 | 1.07 | -0.007 | -1.09 | -1.9 | -0.18 | -0.06 | -0.64 | -0.17 | 0.84 | 0.12 | 0.22 | 1.62 | 0.21 | 0.08 | 0.06 |
ABCC6 | 368 | 16 | 16243421 | 16317328 | 16p13.1 | -0.91 | -1.73 | 0.02 | 0.77 | -3.5 | -0.83 | 0.49 | -2.28 | 2.72 | -1.79 | 2.24 | -3.88 | 2.29 | -0.33 | -3.83 | 2.73 | -0.73 | -1.12 | 0.08 | -3.51 | 1.46 | 1.89 | 0.88 | 0.005 | 1.74 | 1.29 | 1.7 | 0.75 | -1.7 | 1.8 | 1.82 | 1.31 | 0.16 | -0.56 | -1.12 | -0.8 | 2.12 | -2.64 | 1.86 | 1.17 | 1.98 | 2.36 | 0.75 | 3.26 | 2.79 | 2.78 | 0.61 | -2.2 | 1.63 | -1.34 | 2.65 | 0.75 | -0.88 | 0.01 | -3.93 | -2.57 | -0.08 | -4.26 | -2.19 | -2.19 |
ABCC12 | 94160 | 16 | 48116883 | 48180681 | 16q12.1 | -1.14 | -0.12 | 1.34 | 0.3 | -1.63 | -0.81 | -0.38 | 1.05 | -1.23 | 0.27 | 1.18 | 1.22 | 0.24 | -0.83 | 0.81 | 0.62 | -1.86 | 0.43 | -1.23 | 0.43 | 1.75 | 0.98 | -0.6 | -0.97 | 0.04 | 2.13 | 1.27 | 0.29 | 1.53 | 0.45 | 1.98 | -0.12 | 0.66 | -0.69 | -1.09 | 0.4 | 0.23 | 1.24 | 0.42 | 1.97 | -1.9 | 1.13 | -2.14 | -0.94 | 0.22 | -2.43 | -0.11 | -2.5 | -2.07 | 1.44 | -0.42 | 0.22 | 1.25 | -0.14 | -0.44 | 0.4 | 0.8 | -1.26 | -0.35 | -1.32 |
ABCC11 | 85320 | 16 | 48200821 | 48269088 | 16q12.1 | -1.76 | 2.29 | 0.46 | 1.21 | -16.67 | 0.09 | 2.31 | 2.5 | -0.49 | -0.02 | 2.68 | -5.79 | 0.64 | -1.12 | 2.29 | 3.17 | -0.68 | -2.77 | 2.77 | -2.23 | 1.89 | 1.7 | 1.32 | 0.93 | -2.5 | 1.14 | 0.14 | 1.19 | 1.79 | -1.93 | -0.61 | -1.18 | 1.84 | 1.72 | 1.67 | -4.78 | -0.7 | -0.24 | 2.09 | -1.18 | -2.31 | 0.69 | 1.19 | -1.27 | -1.11 | -2.9 | -1.13 | 2.61 | 2.06 | 0.14 | -0.44 | -0.02 | 1.06 | 0.33 | 1.71 | 1.78 | 1 | -0.53 | 1.66 | 2.22 |
ABCC3 | 8714 | 17 | 48712217 | 48769063 | 17q22 | 5.05 | -1.4 | -1.66 | 0.35 | -0.18 | 3.52 | -1.02 | -1.41 | -3.13 | -1.35 | -3.09 | -4.44 | -2.67 | -0.76 | 1.74 | -4.24 | -1.47 | 2.17 | 2.18 | 2.13 | 2.13 | 1.7 | 1 | 0.53 | 1.15 | 2.71 | 3.13 | 2.18 | 0.26 | 3.23 | 3.25 | 2.74 | 2.84 | 1.26 | 0.4 | -3.39 | -0.008 | -1.35 | -3.1 | 3.37 | -3.95 | -1.91 | 0.79 | 1.8 | 2.31 | 2.35 | -3.29 | 3.61 | -3.34 | 4.83 | -1 | -2.84 | -2.72 | -1.81 | -2.86 | 0.05 | -0.85 | 0.65 | -4.01 | -2.18 |
ABCA8 | 10351 | 17 | 66863427 | 66951533 | 17q24 | -0.68 | 3.89 | 1.32 | 1.1 | 0.35 | -0.12 | -0.27 | 2.39 | 2.42 | 2.66 | 1.58 | 0.75 | 0.79 | 0.63 | 3.14 | 2.57 | -1.56 | 0.75 | -0.27 | 0.25 | -3.03 | 1 | -0.52 | -1.83 | -0.49 | 1.32 | 1.27 | -1.11 | 2.12 | -5.87 | -1.46 | -3.72 | -0.31 | -1.55 | -1.91 | 1.05 | -0.004 | 1.74 | 0.15 | 1.38 | -2.96 | -5.62 | -3.34 | 0.28 | 0.41 | -1.53 | 1.59 | -0.91 | -0.79 | 3.07 | -1.15 | 0.04 | 3.23 | -0.23 | 0.86 | -0.45 | 0.97 | -2.2 | -0.47 | -0.76 |
ABCA9 | 10350 | 17 | 66970772 | 67057136 | 17q24.2 | 1.6 | 1.06 | -4.54 | 1.51 | 1.4 | 1.26 | 0.88 | 1.4 | 0.88 | 1.05 | 0.88 | 0.96 | 0.61 | 0.69 | 0.14 | 0.88 | 1.21 | 1.26 | 1.06 | 0.54 | 1.51 | 1.51 | 0.54 | 0.86 | 0.17 | -2.64 | -4.86 | -2.59 | -0.78 | -3.72 | -3.01 | 1.58 | -7.22 | -5.52 | -1.01 | 1.78 | -0.51 | 0.01 | -4.88 | 1.01 | 0.09 | 0.64 | -1.13 | -0.75 | 1.06 | 0.86 | 1.26 | 0.86 | 1.06 | 1.51 | -0.34 | -0.35 | 0.96 | 1.4 | 1.21 | 1.21 | 1.4 | 1.06 | 0.86 | -0.02 |
ABCA6 | 23460 | 17 | 67074846 | 67138015 | 17q24.3 | 1.78 | 1.24 | -3.01 | -2 | 1.58 | 1.44 | 1.06 | 1.58 | 1.06 | 1.23 | 1.06 | 1.14 | 0.79 | 0.87 | 0.32 | 1.06 | 1.39 | 1.44 | 1.24 | 0.72 | -2.52 | -0.36 | 0.72 | 1.04 | 0.35 | -2.65 | -5.91 | 0.77 | -3.38 | -2.77 | 0.79 | -5.68 | 1.69 | 1.49 | -0.83 | 2.03 | -0.33 | 0.19 | -5.98 | -4.21 | 0.27 | -2.1 | -0.95 | -2.28 | 1.24 | 1.04 | 1.44 | 1.04 | 1.24 | -0.73 | -0.16 | -0.17 | 1.14 | 1.58 | 1.39 | 1.39 | 1.58 | 1.24 | 1.04 | 0.15 |
ABCA10 | 10349 | 17 | 67144147 | 67240956 | 17q24 | -0.2 | -1.56 | 0.65 | -0.36 | -1.79 | 1.05 | 1.89 | 0.05 | 0.06 | 1.08 | 0.81 | 1.52 | -1.17 | -1.13 | -1.37 | -2.45 | -0.38 | -1.34 | -0.68 | -1.49 | 0.56 | -1.97 | 2.05 | 1.6 | 1.63 | -0.7 | -1.01 | 2.16 | 1.08 | 1.62 | -0.48 | 0.54 | 1.85 | 1.78 | -0.74 | 0.51 | 0.84 | -0.49 | -0.5 | -0.62 | 1.4 | 0.59 | -2.32 | -0.55 | 0.68 | 0.76 | -1.26 | 0.34 | -1.87 | -0.53 | 1.35 | -0.97 | 0.68 | 0.27 | -1.21 | 0.58 | -0.85 | -0.17 | -0.34 | 0.51 |
ABCA5 | 23461 | 17 | 67240575 | 67323323 | 17q24.3 | -0.25 | -0.79 | -0.44 | -1.71 | -1.37 | -0.55 | 0.6 | -0.57 | 0.27 | 0.39 | -0.86 | 0.71 | -0.2 | 0.21 | -0.86 | 1.97 | 0.77 | -1.69 | 0.11 | -0.62 | 2.31 | -1.04 | 0.58 | 1.91 | 2.68 | -1.18 | -2.93 | 0.45 | -1.07 | -1.48 | -2.08 | 0.17 | -0.34 | 0.42 | 0.37 | 0.61 | -0.66 | 0.14 | -0.55 | -1.32 | 0.7 | -0.33 | 0.07 | 0.33 | 0.58 | -0.006 | -1.2 | 0.06 | -0.09 | -0.9 | -0.05 | -0.24 | 3.41 | 0.08 | 2.13 | 0.8 | -0.008 | 0.93 | 0.81 | 0.82 |
ABCA7 | 10347 | 19 | 1040101 | 1065570 | 19p13.3 | 0.82 | -0.89 | 1.64 | 0.23 | -0.43 | 1.1 | -0.47 | 0.57 | -1.22 | -0.4 | -1.34 | -0.28 | -3.36 | -1.29 | -0.97 | -0.9 | 0.58 | 1.02 | -0.43 | -0.29 | -3.56 | 1.23 | -1.74 | 0.35 | -0.16 | 3.17 | -0.4 | 2.08 | -0.57 | 1.6 | 2.1 | 3.06 | 0.88 | 0.01 | -0.43 | -1.18 | 0.39 | -1.39 | -0.84 | 0.39 | -0.85 | 1.44 | 0.34 | 0.9 | 0.39 | 0.32 | -1.18 | 0.94 | 0.12 | -0.91 | 0.25 | -1.54 | -0.12 | -0.39 | 1.24 | 0.1 | -0.81 | -0.13 | -0.24 | 1.45 |
ABCG1 | 9619 | 21 | 43619798 | 43717354 | 21q22.3 | -3.36 | -0.47 | 1.56 | 0.68 | -2.03 | -0.7 | -1.15 | -0.16 | -1.55 | -0.11 | 1.31 | -2.78 | 0.22 | 1.76 | 1.59 | -2.69 | 2.28 | -0.51 | -2.38 | 0.12 | -0.3 | -6.16 | -2.91 | 1.94 | -1.31 | -0.99 | 0.39 | 1.67 | 3.18 | 2.84 | 0.42 | -1.48 | -0.95 | 2.39 | 0.06 | -0.69 | 0.56 | -2.71 | 3.18 | -1.67 | -4.29 | -0.41 | -0.05 | 3.03 | 0.73 | 1.94 | 0.48 | 1.94 | 2.14 | 1.46 | -2.31 | 0.38 | 0.87 | -0.73 | 2.28 | 2.28 | 0.43 | -2.25 | 1.94 | 1.04 |
ABCB7 | 22 | X | 74273006 | 74376175 | Xq13.3 | 2.25 | -0.42 | 0 | -0.44 | 2.24 | 0.51 | 0.95 | -0.81 | -0.25 | -1.06 | -1.05 | -1.7 | -0.87 | 0.11 | -1.27 | -1.08 | 0.07 | -2.6 | 0.17 | -2.06 | -0.02 | -0.5 | -0.97 | 1.14 | -0.38 | 0.77 | 1.07 | 0.48 | 0.88 | 0.41 | 0.6 | 2.79 | 0.85 | 1.62 | 0.6 | -10.35 | -0.03 | -0.32 | 2.1 | 0.25 | 0.53 | -0.04 | 2.18 | 0.24 | -1.76 | 0.12 | 0.06 | 1.32 | 0.79 | -0.15 | 0.41 | 0.52 | -2.49 | 0.42 | 1.23 | 0.24 | -0.55 | 1.44 | 0.31 | 1.43 |
ABCD1 | 215 | X | 152990322 | 153010216 | Xq28 | 0.26 | -2.71 | -1.44 | 0.47 | -1.29 | -1.32 | -0.19 | -1.63 | -0.49 | -1.06 | -1.63 | 0.19 | 1.74 | 1.13 | 3.24 | 1.06 | 2.87 | 1.12 | 1.61 | -0.21 | 0.62 | 0.25 | 0.79 | -1.28 | 1.27 | -3.16 | -1.51 | -2.33 | -4.24 | -0.57 | -2.25 | -1.09 | -4.12 | -4.54 | 0.48 | -0.1 | 1.43 | -2.36 | -1.72 | 0.19 | 1.48 | 2.21 | -1.4 | 1.69 | 1 | 0.05 | 0.96 | 2 | -0.41 | 3.96 | -0.9 | 1.82 | 1.65 | -0.26 | 2.35 | 2.02 | 0.78 | -0.46 | 1.94 | 2.04 |
RNA: ABC Transporters (RT-PCR):
PMID: 15324696
Manufacturer: NA
Platform: RT_PCR
Platform Description: 47 specific oligonucleotide probes were designed for each of the ABC transporters using DNAStar Primer Select. Expression levels were measured by real-time quantitative RT-PCR using the LightCycler RNA Amplification SYBR Green kit and a LightCycler machine.
Molecular Target: RNA
Principal Collaborators: Laboratory of Cell Biology, CCR, NCI, NIH (M Gottesman, G Szakacs, J Ludwig)
Genomics and Pharmacology Facility, DTB, CCR, NCI, NIH
Raw Data: Crossing point values(log2)
Processing Method: Mean-centered, log2
Identifier: ABC Transporters
Gene symbol: Official gene names as defined by the HUGO Gene Nomenclature Committee (http://www.genenames.org/).
Entrez gene id: Gene identifiers may be found by using the search function at Gene (http://www.ncbi.nlm.nih.gov/gene).
Chromosome number, Start, End and Cytoband: All these parameters are as defined by Affymetrix. The information for individual probes may be queried at (https://www.affymetrix.com/analysis/netaffx/xmlquery.affx?netaffx=mapping). The information for all probes may be downloaded at (http://www.affymetrix.com/estore/esearch/search.jsp?pd=131459&N=4294967292)