return to previous page
CellMiner Address: https://discover.nci.nih.gov/cellminer/
Download Normalized Data: RNA: ABC Transporters (RT-PCR)/log2
CellMiner Database Version: 2.12
Human Genome Version: HG-19
Date: 03-27-2024
Input data: All data
Table 1: RNA: ABC Transporters (RT-PCR)/log2
Intensity values
Gene nameEntrez gene idChromosomeStartEndCytobandBR:MCF7BR:MDA-MB-231BR:HS 578TBR:BT-549BR:T-47DCNS:SF-268CNS:SF-295CNS:SF-539CNS:SNB-19CNS:SNB-75CNS:U251CO:COLO 205CO:HCC-2998CO:HCT-116CO:HCT-15CO:HT29CO:KM12CO:SW-620LE:CCRF-CEMLE:HL-60(TB)LE:K-562LE:MOLT-4LE:RPMI-8226LE:SRME:LOX IMVIME:MALME-3MME:M14ME:SK-MEL-2ME:SK-MEL-28ME:SK-MEL-5ME:UACC-257ME:UACC-62ME:MDA-MB-435ME:MDA-NLC:A549/ATCCLC:EKVXLC:HOP-62LC:HOP-92LC:NCI-H226LC:NCI-H23LC:NCI-H322MLC:NCI-H460LC:NCI-H522OV:IGROV1OV:OVCAR-3OV:OVCAR-4OV:OVCAR-5OV:OVCAR-8OV:SK-OV-3OV:NCI/ADR-RESPR:PC-3PR:DU-145RE:786-0RE:A498RE:ACHNRE:CAKI-1RE:RXF 393RE:SN12CRE:TK-10RE:UO-31
ABCA424194458393945867051p22-3.950.410.371.12-3.65-2.292.232.423.070.01-4.322.452.64-1.032.20.272.651.71-5.343.371.81-5.561.23-1.742.091.642.051.11.712.15-2.831.661.761.641.59-1.092.47-1.83-6.98-3.970.152.711.1-3.75-3.4-5.171.82-0.42-1.030.75-3.951.11.791.971.63-1.3-1.6-0.311.583.01
ABCD35825194883932949842191p21.31.68-2.07-1.8-0.661.33-0.005-0.96-0.23-0.39-1.07-1.18-0.89-0.22-0.25-1.09-1.021.22-0.6-0.53-1.251.07-0.531.062.08-0.230.320.36-0.43-0.731-0.342.430.781.691.57-1.070.02-1.130.43-0.112.560.221.4-0.3-1.34-0.86-1.03-0.001-1.170.450.0010.48-0.8-0.050.740.58-1.11.49-0.150.68
ABCB102345612296523282296944421q42.131.65-1.08-0.35-0.4-0.21-0.450.330.82-0.33-0.990.61-0.51-0.760.33-2.41-1.29-0.1-1.24-1.19-3.08-0.970.41-1.810.910.580.750.71.37-0.040.180.080.590.780.741.09-1.16-0.2-1.71.780.52-0.27-0.960.41-0.210.821.09-0.331.47-0.530.370.4-0.07-1.40.44-0.25-0.3-0.520.7-0.015.21
ABCG564240244039610440659582p21-0.04-0.060.640.190.750.170.340.04-0.70.520.140.080.290.350.320.09-0.78-0.21-0.090.471.10.670.450.2-1.23-2.27-1.41-1.61-1.070.72-1.22-0.820.670.05-1.160.74-0.030.441.290.951.430.490.83-0.03-0.55-0.83-0.22-0.61-0.730.490.391.470.09-0.36-0.360.961.29-0.90.02-1.89
ABCG864241244066102441056052p21-0.81-0.263.09-0.89-1.451.083.24-1.233.243.413.24-2.21-1.583.05-0.493.24-1.76-0.13-1.722.90.47-0.0072.9-2.55-0.28-3.08-0.72-3.832.18-0.032.97-2.62-1.59-3.621.341.911.842.37-0.21-2.532.4531.22-3.03-2.15-1.640.86-11.56-0.69-3.182.0120.26-0.34-0.64-1.534.41-2.860.222.33
ABCB11864721697794481698878332q24-0.611.12-0.710.031.281.351.14-3.01-4.81-2.76-3-1.28-2.711.81.12-4.781.572.241.6-2.41-1.151.160.151.29-3.760.550.960.010.621.0710.570.670.550.52.34-0.921.441.881.211.24-2.280.02-1.07-4.050.0091.81.440.890.85-8.10.011.972.320.540.911.861.570.492.16
ABCA122615422157962652160031512q34-5.422.062.962.51-7.132.26-0.67-0.54-1.72-2.41.16-6.891.62-1.761.14-1.57-3.232.262.061.542.512.511.541.871.172.692.021.6-2.262.760.28-2.792.512.31-0.009-0.860.48-0.18-2.761.051.10.81-0.132.962.061.872.261.872.062.510.650.64-3.85-5.06-3.84-4.1-7.352.061.87-3.2
ABCB61005822200744872200837122q360.010.19-1.370.25-0.37-0.21-1.14-1.52-2.17-0.79-2.250.61-1.890.090.340.380.4-0.22-0.640.78-0.291.851.891.210.341.130.230.460.13-1.56-0.65-0.38-0.55-0.28-1.530.690.630.880.661.15-0.20.18-0.72-0.860.080.350.020.851.720.290.74-0.15-0.58-1.080.91.34-0.390.0050.190.78
ABCC51005731836377231837357273q27-2.432.67-2.42-0.451.595.364.84-2.081.41-0.891.530.41-2.25-0.57-0.232.230.770.19-1.6-1.3-3.94-1.840.394.8-3.52-0.73-0.40.57-0.56-0.9-4.41-3.951.661.54-0.424.73-1.672.322.561.38-0.50.45-2.02-2.51-0.65-0.55-0.44-0.88-0.13-1.13-1.310.17-0.384.181.08-0.070.32.73-1.96-0.72
ABCF35532431839038621839117953q27.10.63-1.01-0.99-0.51-0.360.72-0.49-1.01-0.37-0.61-0.720.12-0.570.66-0.78-0.270.430.021.190.490.19-0.14-0.50.150.09-0.470.32-0.46-0.070.82-0.40.810.521.040.810.51-0.01-0.290.88-0.170.060.72-0.110.57-1.080.2-0.751.120.57-0.560.37-0.03-1.070.10.24-0.06-1.011.74-0.14-1.05
ABCG29429489011415891524744q22-1.3-0.58-0.510.020.13-1.79-4.311.841.79-1.61.89-1.41-5.230.711.82-3.63-4.954.380.434.741.843.84-6.752.952.48-1.17-0.16-1.15-0.47-0.01-1.53-1.6-2.78-2.410.023.32-3.43-14.31-3.37-3.83-3.122.72.191.050.661.81.51.112.774.74-0.29-2.081.570.911.810.71-2.221.271.33
ABCE1605941460191551460506764q311.22-1.12-0.98-1.242.82-0.24-0.97-0.53-0.84-0.61-0.5-0.46-0.32-0.47-1.36-1.06-0.05-1.33-0.11-1.65-1.23-2.02-0.480.160.010.140.911.310.771.33-0.411.821.13.112.930.08-0.180.142.38-0.62.550.172.870.2-1.730.48-0.62-0.07-0.03-1.34-0.22-1-1.92-0.21-0.13-0.3-0.040.920.08-1.06
ABCF123630539169305593096p21.330.64-1.91-1.16-1.620.40.190.41-1.76-0.01-0.59-0.21-0.42-1.050.720.510.232.240.710.16-0.76-1.31-0.5-0.81-0.19-0.661.760.91-2.240.350.66-0.530.910.30.511.770.44-0.76-0.090.59-0.360.61.050.191.1-1.121.040.220.990.67-1.390.510.22-1.360.840.3-0.36-1.080.35-0.560.27
TAP26891632789609328066006p21.31.23-1.15-0.33-0.381.390.65-1.77-0.681.11-1.59-3.710.99-0.4-0.150.13-0.89-1.230.691.09-0.341.32-1.670.32-1.88-0.881.682.33-0.412.240.041.89-0.550.33-1.21-2.391.190.60.28-0.350.43-0.221.16-0.320.02-0.39-0.19-0.060.360.840.410.690.4-2.28-0.190.441.182.13-0.33-0.15-1.47
TAP16890632812985328217486p21.30.830.005-1.77-1.822.83-1.71.72-3.021.63-3.92.2-0.51-0.79-1.470.47-2.311.290.97-0.11-0.680.55-0.21-2.58-0.95-3.540.471.290.493.370.2-0.92-0.521.91.37-1.780.95-1.391.88-0.792.310.690.40.210.090.540.371.150.43-0.58-0.07-0.540.63-1.322.780.88-0.87-1.370.76-1.451.26
ABCC1089845643395291434181636p21.10.0031.22-1.57-0.690.73-0.11-0.37-0.20.39-0.1-1.213.164.38-4.440.99-0.03-0.5-0.390.730.070.0020.460.530.91-0.620.770.19-0.310.921.421.162.240.94-0.36-2-0.79-0.271.20.271.06-1.31.13-0.171.22-0.35-1.240.11-0.97-1.08-3.2-1.040.28-0.592.75-0.97-0.41-1.661.22-1.5-2
ABCB5340273720655244207966377p21.10.50.331.710.591.190.260.170.38-1-0.39-0.040.480.470.210.760.750.520.07-1.110.750.771.220.54-0.991.05-3.411.1-2.46-3.29-3.71-7.66-2.05-5.35-2.27-0.171.890.731.091.072.090.171.59-0.450.771.160.860.371.030.611.040.160.970.36-0.0021.231.921.32-0.430.340.06
ABCB45244787031360871050197q21.1-4.342.453.722.72-1.012.04-5.65-0.99-3.214.14-5.45.342.663.24-1.86-1.083.22-3.10.442.44-0.57-0.222.350.49-0.07-5.07-4.97-101.720.24-3.180.480.450.922.76-0.82-3.770.34.35-3.235.770.681.154.510.782.02-1.83-3.165.94-7.613.070.482.760.310.72-0.51-2.043.55-0.009-4.59
ABCB15243787133178873426397q21.122.291.7-0.120.621.861.93-2.471.911.983.052.091.952.132.38-11.081.861.54-3.19-1.91-0.53-0.0061.740.731.871.591.13-2.740.61.2-1.311.661.151.251.131.08-3.571.962.022.461.791.82-3.050.6-1.92.632.632.38-1.941.47-12.272.490.59-2.84-4.31-3.68-8.231.222.151.07-4.68
CFTR108071171200161173087187q31.21.36-2.070.140.431.65-1.77-2.22-0.19-3.521.11-0.79-0.52-4.550.510.92-4.03-1.88-0.23-3.41-0.76-1.95-7.98-2.48-1.830.680.350.051.71-0.891.974.580.470.02-1.20.432.042.18-0.711.122.831.732.89-1.450.431.64-3.650.890.27-0.284.362.871.77-0.640.81.771.171.46-0.840.462.72
ABCB81119471507255081507448697q361.510.06-0.96-0.361.85-1.15-0.55-1.97-0.71-0.67-0.67-0.98-0.880.860.50.3710.830.980.23-0.65-1.540.170.23-0.18-0.85-0.210.10.14-0.31-0.262.46-0.120.742.950.16-1.89-0.640.92-0.36-1.630.9621.830.861.121.0531.08-0.77-0.33-0.56-0.25-0.69-1.13-2.97-2.11.04-1.38-1.24
ABCF21006171509049221509244607q361.04-0.19-1.07-1.041.90.66-0.380.290.770.23-0.68-0.47-0.94-0.14-1.14-0.490.98-0.060.61-0.65-0.87-1.77-1.07-1.49-0.94-1.010.570.871.20.090.020.080.291.341.35-0.710.06-10.42-0.760.260.252.180.48-0.780.150.031.061.61-0.690.24-0.530.11-1.02-0.77-0.442.540.64-0.11-1.14
ABCA11991075432831076905279q31.12.06-0.360.5-0.362.491.830.23-0.570.48-0.752.192.582.612.39-1.41-2.962.64-0.160.63-2.951.93-2.04-0.7-0.620.1-0.060.011.19-0.38-1.062.29-0.04-0.260.11-0.351.050.67-0.1-2.062.42-0.62-0.7-0.910.08-2.61.90.65-0.390.5-0.37-0.541.22-3.28-1.26-0.03-1.37-1.63-2.14-1.22-0.47
ABCA22091399016851399233749q34-0.790.13-0.050.67-0.60.17-0.050.711.08-0.811.331.830.410.20.52-0.18-0.891.040.01-1.061.092.48-0.930.550.030.22-0.02-0.020.480.69-0.251.03-0.17-0.89-0.910.070.380.71-0.031.99-1.050.4-1.950.77-0.3-1.01-0.54-0.24-0.92-0.46-0.75-1.44-1.250.30.29-1.1-0.270.23-0.940.06
ABCC212441010154235410161194910q241.112.830.01-0.154.462.02-0.040.293.250.991.19-3.18-4.68-4.854.15.63-0.52-2.690.481.414.271.035.612.970.24-3.84-5.61-3.08-3.39-6.05-5.39-1.17-4.46-4.49-0.151.95-0.931.78-0.26-1.85-4.08-7.224.270.181.310.821.833.181.362.61-1.571.89-5.281.920.430.741.9741.73
ABCC8683311174144311749839211p15.1-2.180.591.491.040.93-5.970.420.930.420.580.420.490.150.22-0.320.420.74-2.10.590.071.041.040.070.4-0.291.220.550.131.631.290.151.111.040.84-1.481.38-0.98-0.451.63-3.09-0.36-0.1-1.6-4.980.590.4-2.320.4-2.051.04-0.81-0.820.490.930.740.740.930.590.4-0.49
ABCG4641371111901974911903337411q23.32.37-1.61-0.6-1.36-0.98-3.910.031.55-1.4320.51.562.47-0.741.281.1-1.410.67-3.320.16-0.86-0.21-1.1-2.17-0.1-0.57-0.83-1.57-2.870.282.490.2-1.81-1.53-1.40.432.07-0.16-1.31-1.40.652.65-1.471.33-1.28-0.950.34-0.24-0.441.862.460.241.61-0.16-0.373.131.59-1.142.162.12
ABCC91006012219503232208962812p12.1-0.482.27-2.822.6-1.22-1.660.62.822.492.21.473.993.65-0.490.831.78-0.011.41-0.071.49-1.730.96-1.18-8.14-0.790.852.853.63-7.581.033.65-1.141.31-2.032.02-0.31-1.24-0.06-3.380.393.13-8.221.89-1.042.06-1.370.5-1.23-1.462.02-0.610.243.99-0.8-5.08-1.790.12-4.47-0.873
ABCD222512399450214001384312q12-0.970.881.20.06-0.53-0.55-0.080.25-0.78-0.340.840.561.70.40.590.24-1.42-0.01-1.33-0.390.920.7-0.61-0.71-0.331.470.75-0.381.40.781.90.770.55-0.87-0.970.550.120.840.841.6-2.490.62-1.740.150.13-2.01-0.42-1.3-1.750.38-0.80.30.371.350.040.270.2-0.43-0.99-1.56
ABCB9234571212340549712345105612q24-0.26-0.83.850.570.240.97-1.17-2.09-0.92-1.07-1.62-1.02-1.1-0.42-0.59-0.7-0.050.51.762.76-0.141.170.751.180.67-1.18-0.37-1.520.57-0.310.74-1.08-0.51-0.83-0.221.070.21-0.830.42-0.440.21.191.550.08-1.560.48-0.210.690.71-1.680.83-0.30.760.83-0.44-0.18-0.39-0.250.13-0.58
ABCC41025713956720829595370013q322.76-0.80.62-1.6913.620.79-0.69-1.031.52-0.20.830.121.82-0.430.39-0.2-0.71-0.230.31-1.74-1.060.98-1.240.13-1.961.040.190.71-1.42-2.09-1.16-1.12-1.2-0.42-1.69-0.480.390.25-1.10.712.590.7-1.260.49-0.26-2.63-0.39-1.922.40.03-0.90.04-1.08-0.510.38-1.46-0.950.05-0.81
ABCD4582614747519797476976714q24.30.19-1.530.291.25-0.01-0.642.44-0.670.490.170.140.351.06-0.990.91.14-0.38-0.58-1.540.53-0.62-0.880.96-1.29-0.950.681.690.280.83-0.18-1.46-1.02-3.83-0.761.261.57-0.36-0.080.160.57-0.141.06-0.360.04-2.31-0.38-1.59-0.22-1.480.850.11-0.12-0.021.460.781.810.230.220.210.63
ABCA321162325878239074716p13.3-3.79-0.932.87-3.78-5.1-4.640.638.09-1.672.871.356.992.750.41-2.34.62-3.410.657.272.39-5.225.09-0.04-6.295.212.623.685.694.0926.673.474.964.63-3.82-3.370.710.03-2.83-2.720.25-0.03-5.19-3.311.56-0.82-3.34-4.11-3.41-2.4-2.59-2.411.55-2.42-3.051.18-2.51-0.97-4.14-3.67
ABCC1436316160434331623693016p13.10.770.250.210.592.48-0.050.51-1.690.4-0.01-0.61-0.940.05-0.280.19-0.59-0.38-0.02-0.6-0.81-1.12-0.45-0.550.19-0.170.951.311.60.31.14-0.03-0.380.951.020.560.03-0.830.43-0.64-0.23-1.35-0.41-0.7-0.56-0.711.07-0.007-1.09-1.9-0.18-0.06-0.64-0.170.840.120.221.620.210.080.06
ABCC636816162434211631732816p13.1-0.91-1.730.020.77-3.5-0.830.49-2.282.72-1.792.24-3.882.29-0.33-3.832.73-0.73-1.120.08-3.511.461.890.880.0051.741.291.70.75-1.71.81.821.310.16-0.56-1.12-0.82.12-2.641.861.171.982.360.753.262.792.780.61-2.21.63-1.342.650.75-0.880.01-3.93-2.57-0.08-4.26-2.19-2.19
ABCC129416016481168834818068116q12.1-1.14-0.121.340.3-1.63-0.81-0.381.05-1.230.271.181.220.24-0.830.810.62-1.860.43-1.230.431.750.98-0.6-0.970.042.131.270.291.530.451.98-0.120.66-0.69-1.090.40.231.240.421.97-1.91.13-2.14-0.940.22-2.43-0.11-2.5-2.071.44-0.420.221.25-0.14-0.440.40.8-1.26-0.35-1.32
ABCC118532016482008214826908816q12.1-1.762.290.461.21-16.670.092.312.5-0.49-0.022.68-5.790.64-1.122.293.17-0.68-2.772.77-2.231.891.71.320.93-2.51.140.141.191.79-1.93-0.61-1.181.841.721.67-4.78-0.7-0.242.09-1.18-2.310.691.19-1.27-1.11-2.9-1.132.612.060.14-0.44-0.021.060.331.711.781-0.531.662.22
ABCC3871417487122174876906317q225.05-1.4-1.660.35-0.183.52-1.02-1.41-3.13-1.35-3.09-4.44-2.67-0.761.74-4.24-1.472.172.182.132.131.710.531.152.713.132.180.263.233.252.742.841.260.4-3.39-0.008-1.35-3.13.37-3.95-1.910.791.82.312.35-3.293.61-3.344.83-1-2.84-2.72-1.81-2.860.05-0.850.65-4.01-2.18
ABCA81035117668634276695153317q24-0.683.891.321.10.35-0.12-0.272.392.422.661.580.750.790.633.142.57-1.560.75-0.270.25-3.031-0.52-1.83-0.491.321.27-1.112.12-5.87-1.46-3.72-0.31-1.55-1.911.05-0.0041.740.151.38-2.96-5.62-3.340.280.41-1.531.59-0.91-0.793.07-1.150.043.23-0.230.86-0.450.97-2.2-0.47-0.76
ABCA91035017669707726705713617q24.21.61.06-4.541.511.41.260.881.40.881.050.880.960.610.690.140.881.211.261.060.541.511.510.540.860.17-2.64-4.86-2.59-0.78-3.72-3.011.58-7.22-5.52-1.011.78-0.510.01-4.881.010.090.64-1.13-0.751.060.861.260.861.061.51-0.34-0.350.961.41.211.211.41.060.86-0.02
ABCA62346017670748466713801517q24.31.781.24-3.01-21.581.441.061.581.061.231.061.140.790.870.321.061.391.441.240.72-2.52-0.360.721.040.35-2.65-5.910.77-3.38-2.770.79-5.681.691.49-0.832.03-0.330.19-5.98-4.210.27-2.1-0.95-2.281.241.041.441.041.24-0.73-0.16-0.171.141.581.391.391.581.241.040.15
ABCA101034917671441476724095617q24-0.2-1.560.65-0.36-1.791.051.890.050.061.080.811.52-1.17-1.13-1.37-2.45-0.38-1.34-0.68-1.490.56-1.972.051.61.63-0.7-1.012.161.081.62-0.480.541.851.78-0.740.510.84-0.49-0.5-0.621.40.59-2.32-0.550.680.76-1.260.34-1.87-0.531.35-0.970.680.27-1.210.58-0.85-0.17-0.340.51
ABCA52346117672405756732332317q24.3-0.25-0.79-0.44-1.71-1.37-0.550.6-0.570.270.39-0.860.71-0.20.21-0.861.970.77-1.690.11-0.622.31-1.040.581.912.68-1.18-2.930.45-1.07-1.48-2.080.17-0.340.420.370.61-0.660.14-0.55-1.320.7-0.330.070.330.58-0.006-1.20.06-0.09-0.9-0.05-0.243.410.082.130.8-0.0080.930.810.82
ABCA710347191040101106557019p13.30.82-0.891.640.23-0.431.1-0.470.57-1.22-0.4-1.34-0.28-3.36-1.29-0.97-0.90.581.02-0.43-0.29-3.561.23-1.740.35-0.163.17-0.42.08-0.571.62.13.060.880.01-0.43-1.180.39-1.39-0.840.39-0.851.440.340.90.390.32-1.180.940.12-0.910.25-1.54-0.12-0.391.240.1-0.81-0.13-0.241.45
ABCG1961921436197984371735421q22.3-3.36-0.471.560.68-2.03-0.7-1.15-0.16-1.55-0.111.31-2.780.221.761.59-2.692.28-0.51-2.380.12-0.3-6.16-2.911.94-1.31-0.990.391.673.182.840.42-1.48-0.952.390.06-0.690.56-2.713.18-1.67-4.29-0.41-0.053.030.731.940.481.942.141.46-2.310.380.87-0.732.282.280.43-2.251.941.04
ABCB722X7427300674376175Xq13.32.25-0.420-0.442.240.510.95-0.81-0.25-1.06-1.05-1.7-0.870.11-1.27-1.080.07-2.60.17-2.06-0.02-0.5-0.971.14-0.380.771.070.480.880.410.62.790.851.620.6-10.35-0.03-0.322.10.250.53-0.042.180.24-1.760.120.061.320.79-0.150.410.52-2.490.421.230.24-0.551.440.311.43
ABCD1215X152990322153010216Xq280.26-2.71-1.440.47-1.29-1.32-0.19-1.63-0.49-1.06-1.630.191.741.133.241.062.871.121.61-0.210.620.250.79-1.281.27-3.16-1.51-2.33-4.24-0.57-2.25-1.09-4.12-4.540.48-0.11.43-2.36-1.720.191.482.21-1.41.6910.050.962-0.413.96-0.91.821.65-0.262.352.020.78-0.461.942.04
Footnotes:

RNA: ABC Transporters (RT-PCR):

PMID: 15324696
Manufacturer: NA
Platform: RT_PCR
Platform Description: 47 specific oligonucleotide probes were designed for each of the ABC transporters using DNAStar Primer Select. Expression levels were measured by real-time quantitative RT-PCR using the LightCycler RNA Amplification SYBR Green kit and a LightCycler machine.
Molecular Target: RNA
Principal Collaborators: Laboratory of Cell Biology, CCR, NCI, NIH (M Gottesman, G Szakacs, J Ludwig)
Genomics and Pharmacology Facility, DTB, CCR, NCI, NIH
Raw Data: Crossing point values(log2)
Processing Method: Mean-centered, log2

Identifier: ABC Transporters

Gene symbol: Official gene names as defined by the HUGO Gene Nomenclature Committee (http://www.genenames.org/).

Entrez gene id: Gene identifiers may be found by using the search function at Gene (http://www.ncbi.nlm.nih.gov/gene).

Chromosome number, Start, End and Cytoband: All these parameters are as defined by Affymetrix. The information for individual probes may be queried at (https://www.affymetrix.com/analysis/netaffx/xmlquery.affx?netaffx=mapping). The information for all probes may be downloaded at (http://www.affymetrix.com/estore/esearch/search.jsp?pd=131459&N=4294967292)