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Error Codes

Error Code Error Description Error Explanation Corrective Action
1 Unexpected Error. Gominer team will be notified. Please check the total and changed file format. Not Applicable Not Applicable
10 Empty Total File. Not Applicable Not Applicable
11 Incorrect file format in total genes file. Usually means multiple columns on some line(s) of the total file. Edit your total file so that it has only one column
12 Inconsistency in changed-gene file number of columns. Some lines have 2 columns; other lines have 1 column. Not Applicable
13 Incorrect number of columns in changed-gene file. > 2 columns on someline(s) in the changed gene file. Make each row in the changed gene file have one column or two columns
14 Error in second column of 2 column changed-gene file format. Second column contains something other than "-1," "+1," or "1." Not Applicable
15 Illegal duplication in changed-gene file. Two different lines have same gene symbol but differing "-1" or "+1" in second column. Not Applicable
16 Changed genes not a subset of total genes. An entry in changed file does not appear in total file. Concatenate the changed genes file into the total genes file.
17 The File has binary content. Not Applicable Not Applicable
21 Report of excel error in gene file found by SymbolMutationScan. Data was previously corrupted within Excel spreadsheet. See http://www.biomedcentral.com/1471-2105/5/80. http://discover.nci.nih.gov/symbolmutation/our_suggested_workarounds.jsp. As a quick fix, you can delete the genes in question from your input file(s), or you can replace the questionable gene symbol with your guess of the correct gene symbol.
22 Gene To Date Mutation. Data was previously corrupted within Excel spreadsheet (e.g., "septin2" was converted to "2-Sep"). See http://www.biomedcentral.com/1471-2105/5/80. http://discover.nci.nih.gov/symbolmutation/our_suggested_workarounds.jsp. As a quick fix, you can delete the genes in question from your input file(s), or you can replace the questionable gene symbol with your guess of the correct gene symbol.
23 Gene To Floating Point Number. Data was previously corrupted within Excel spreadsheet. See http://www.biomedcentral.com/1471-2105/5/80. http://discover.nci.nih.gov/symbolmutation/our_suggested_workarounds.jsp. As a quick fix, you can delete the genes in question from your input file(s), or you can replace the questionable gene symbol with your guess of the correct gene symbol.
130 Internal error due to empty input file for TF server. Not Applicable Not Applicable
135 Internal error due to NULL input file for TF server. Not Applicable Not Applicable
140 Internal error due to missing input file for TF server. Not Applicable Not Applicable
145 Internal error due to invalid argument for TF server. Not Applicable Not Applicable
150 Request for species not curently supported by TF server. Not Applicable Not Applicable
300 Job processing timeout. Not Applicable Resubmit at later time when our server is less busy, and/or reduce number/size of your zipped changed genes files.
510 Total Job count max limit reached. Not Applicable Resubmit at later time when our server is less busy.
511 Job count max limit reached for the user. Not Applicable Resubmit at later time after some of your pending jobs have completed.
512 Error in parameters provided in config file. Please check the entries in the config file. Relevant only if you submitted a command-line job. See http://discover.nci.nih.gov/gominer/htgmcommand.jsp. Not Applicable
513 Could not locate config file. Relevant only if you submitted a command-line job. See http://discover.nci.nih.gov/gominer/htgmcommand.jsp. Not Applicable
514 No hits found in GO database for total genes file.Please use total file that has some hits in GO database. Not Applicable Use total file that has some hits in GO database.
515 TF Server Communication Error. Not Applicable Not Applicable
516 When using AUTOGENERATE you must select an organism - otherwise list would be too large! Not Applicable Select an organism.
517 For your choice of Data Source, you must deselect the Enhanced Lookup settings. Not Applicable Deselect the Enhanced Lookup setting.

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GoMiner was originally developed jointly by the Genomics and Bioinformatics Group (GBG) of LMP, NCI, NIH and the Medical Informatics and Bioimaging group of BME, Georgia Tech/Emory University. It is now maintained and under continuing development by GBG.

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