Genomics and Bioinformatics Group Genomics and Bioinformatics Group Genomics and Bioinformatics Group
Genomics and Bioinformatics Group

2003 Publication

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Karyotypic complexity of the NCI-60 drug-screening panel
Cancer Res. 2003 Dec 15;63(24):8634-47
Roschke AV, Tonon G, Gehlhaus KS, McTyre N, Bussey KJ, Lababidi S, Scudiero DA, Weinstein JN, Kirsch IR

Comparing cDNA and Oligonucleotide Array Data: Concordance of Gene Expression Across Platforms for the NCI-60 Cancer Cells
Genome Biol. 2003;4(12):R82
Lee JK, Bussey KJ, Gwadry FG, Reinhold W, Riddick G, Pelletier SL, Nishizuka S, Szakacs G, Annereau JP, Shankavaram U, Lababidi S, Smith LH, Gottesman MM, Weinstein JN.

Proteomic Profiling of the NCI-60 Cancer Cell Lines Using New High-density Reverse-phase Lysate Microarrays
Proceedings of the National Academy of Science USA 2003 November 25th; 100(24): 14229-14234
Satoshi Nishizuka, Lu Charboneau, Lynn Young, Sylvia Major, William C. Reinhold, Mark Waltham, Hosein Kouros-Mehr, Kimberly J. Bussey, Jae K. Lee, Virginia Espina, Peter J. Munson, Emanuel Petricoin III, Lance A. Liotta , and John N. Weinstein

Transcriptomic Analysis of the NCI-60 Cancer Cell Lines
C R Biol. 2003 Oct-Nov;326(10-11):909-20
Weinstein, J.N. and Pommier, Y.

Diagnostic Markers That Distinguish Colon and Ovarian Adenocarcinomas: Identification by Genomic, Proteomic, and Tissue Array Profiling
Cancer Res 2003 Sep 1;63(17):5243-50
Satoshi Nishizuka, Sing-Tsung Chen, Fuad G. Gwadry, Jes Alexander, Sylvia M. Major, Uwe Scherf, William C. Reinhold, Mark Waltham, Lu Charboneau, Lynn Young, Kimberly J. Bussey, Sohyoung Kim, Samir Lababidi, Jae K. Lee, Stefania Pittaluga, Dominic A. Scudiero, Edward A. Sausville, Peter J. Munson, Emmanuel F. Petricoin III, Lance A. Liotta, Stephen M. Hewitt, Mark Raffeld, and John N. Weinstein

Apoptosis induced by topoisomerase inhibitors
Curr Med Chem Anti-Canc Agents. 2003 Jul;3(4):271-90.
Sordet O, Khan QA, Kohn KW, Pommier Y.

Impact of p53-knockout and Topotecan Treatment on Gene Expression Profiles in Human Colon Carcinoma Cells: A Pharmacogenomics Study.
Cancer Res 2003 Jun 1;63(11):2782-93
Sayed S. Daoud, Peter J. Munson, William Reinhold, Lynn Young, Vinay V. Prabhu, Qiang Yu, Jihyun LaRose, Kurt W. Kohn, John N. Weinstein and Yves Pommier

Apoptotic Susceptibility of Cancer Cells Selected for Camptothecin Resistance: Gene Expression Profiling, Functional Analysis, and Molecular Interaction Mapping
Cancer Res 2003 Mar 1;63(5):1000-11
William C. Reinhold, Hosein Kouros-Mehr, Kurt W. Kohn, Alika K. Maunakea, Samir Lababidi, Anna Roschke, Kristen Stover, Jes Alexander, Panayotis Pantazis, Lance Miller, Edison Liu, Ilan R. Kirsch, Yoshimasa Urasaki, Yves Pommier, and John N. Weinstein

MatchMiner: A Tool for Batch Navigation among Gene and Gene Product Identifiers
Genome Biol, 4(4):R27
Bussey KJ, Kane D, Sunshine M, Narasimhan S, Nishizuka S, Reinhold WC, Zeeberg B, Ajay, Weinstein JN

GoMiner: A Resource for Biological Interpretation of Genomic and Proteomic Data
Genome Biol, 4(4):R28
Zeeberg BR, Feng W, Wang G, Wang MD, Fojo AT, Sunshine M, Narasimhan S, Kane DW, Reinhold WC, Lababidi S, Bussey KJ, Riss J, Barrett JC, Weinstein JN

Cell cycle and checkpoints in oncology: new therapeutic targets
Med Sci (Paris). 2003 Feb;19(2):173-86
Pommier Y, Kohn KW


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