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NCI-60 Analysis Tools

NCI-60 Analysis Tools

This page provides automation of several commonly done analyses. For a complete description of the CellMiner options, go to the "Home" tab above.

Step 1: Select analysis type:
             
      
                           
1 Complete list of drugs available for analysis [download]. List contains i) NSC#s ii) Drug names, iii) mechanism of action, iv) clinical status, v) PubChem ids.
2 Complete list of microRNA identifiers available for analysis [download].
3 Pattern Comparison template file [download]. Edit the pattern name and add values next to the cell lines. Use the "Upload file" option in Step 2 to submit your pattern.

Step 2: Identifiers may be input as a list or a file (maximum 150 names). Select input format:

Input the identifier(s):
Examples:   abcb1
BRCA2
CNBP
Note: this will return only exact matches to the list entered.

Step 3: Your E-mail Address

Your results will be emailed to you when they are complete.

For a detailed description of the functionalities and how to use them, see (Reinhold, Cancer Res, 2012).

CellMiner™ is a development of the Genomics and Bioinformatics Group, Laboratory of Molecular Pharmacology (LMP), Center for Cancer Research (CCR), National Cancer Institute (NCI). Please email us with any problems, questions or feedback on the tool.

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