CellMinerCDB

Download Raw Data Set

Download .cel files, pixel intensities, or the like, depending on platform. See the "Data Set Metadata" page to see the raw data description.

Step 1 - Select a data set:

Large datasets available from GEO (due to size constraints):

• DNA: Affy 500K

• DNA: Illumina 1M SNP

• RNA: Affy HuEx 1.0

All others available from CellMiner:

DNA: aCGH Agilent 44K

DNA: E-cadherin Methylation

DNA: Fingerprinting

DNA: Roche NimbleGen 385k aCGH

DNA: Sanger sequencing

RNA: Affy HG-U133 Plus 2.0

RNA: Affy HG-U133A

RNA: Affy HG-U133B

RNA: Affy HG-U95(A-E)

RNA: Agilent Human microRNA (V2)

RNA: Agilent mRNA

RNA: microRNA OSU V3 chip

RNA: OSU Transporter Array

Protein: Lysate Array

Compound activity: DTP NCI-60

Download Processed Data Set

Download processed values ready for analysis and/or integration with other data sets.

Step 1 - Select one or more processed data set(s) to download:

Data type

Processing method

Data type

Processing method

DNA: Affy 500K SNP

Processing method

DNA: Combined aCGH

Processing method

DNA: E-cadherin Methylation

Processing method

DNA: Exome Seq

Processing method

DNA: Illumina 1M SNP

Processing method

DNA: Illumina 450K methylation

Processing method

DNA: Roche NimbleGen 385k aCGH

Processing method

DNA: aCGH Agilent 44K

Processing method

RNA: 5 Platform Gene Transcript

Processing method

RNA: ABC Transporters (RT-PCR)

Processing method

RNA: Affy HG-U133 Plus 2.0

Processing method

RNA: Affy HG-U133(A-B)

Processing method

RNA: Affy HG-U95(A-E)

Processing method

RNA: Affy HuEx 1.0

Processing method

RNA: Agilent Human microRNA (V2)

Processing method

RNA: Agilent mRNA

Processing method

RNA: OSU Transporter Array

Processing method

RNA: RNA-seq

Processing method

RNA: microRNA OSU V3 chip

Processing method

Protein: Lysate Array

Processing method

Protein: SWATH (Mass spectrometry)

Processing method

Compound activity: DTP NCI-60

Processing method